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1

Kinetic theory of pattern formation in mixtures of microtubules and molecular motors

Maryshev, Ivan, Marenduzzo, Davide, Goryachev, Andrew B., Morozov, Alexander

Journal:

Physical Review E

Year:

2018

Language:

english

File:

PDF, 5.13 MB

english, 2018

2

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Mathematical Modeling of the Human Energy Metabolism Based on the Selfish Brain Theory

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 589 KB

english, 2012

3

Local and global Cdc42 GEFs for fission yeast cell polarity are coordinated by microtubules and the Tea1/Tea4/Pom1 axis

Tay, Ye Dee, Leda, Marcin, Goryachev, Andrew B., Sawin, Kenneth E.

Journal:

Journal of Cell Science

Year:

2018

Language:

english

File:

PDF, 6.98 MB

english, 2018

4

Design principles of the bacterial quorum sensing gene networks

Andrew B. Goryachev

Journal:

Wiley Interdisciplinary Reviews: Systems Biology and Medicine

Year:

2009

Language:

english

File:

PDF, 221 KB

english, 2009

5

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Time-Structure of the Yeast Metabolism In vivo

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 1.30 MB

english, 2012

6

Altered expression of genes involved in hepatic morphogenesis and fibrogenesis are identified by cDNA microarray analysis in biliary atresia

Limin Chen, Andrew Goryachev, Jin Sun, Peter Kim, Hui Zhang, M.James Phillips, Pascale Macgregor, Sylvie Lebel, Aled M. Edwards, Qiongfang Cao, Katryn N. Furuya

Journal:

Year:

2003

Language:

english

File:

PDF, 344 KB

english, 2003

7

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Cell Death and Life in Cancer: Mathematical Modeling of Cell Fate Decisions

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 755 KB

english, 2012

8

Excitable behavior can explain the “ping-pong” mode of communication between cells using the same chemoattractant

Andrew B. Goryachev, Alexander Lichius, Graham D. Wright, Nick D. Read

Journal:

Year:

2012

Language:

english

File:

PDF, 279 KB

english, 2012

9

A Catalytic Role for Mod5 in the Formation of the Tea1 Cell Polarity Landmark

Claudia C. Bicho, David A. Kelly, Hilary A. Snaith, Andrew B. Goryachev, Kenneth E. Sawin

Journal:

Current Biology

Year:

2010

Language:

english

File:

PDF, 915 KB

english, 2010

10

Dynamics of Cdc42 network embodies a Turing-type mechanism of yeast cell polarity

Andrew B. Goryachev, Alexandra V. Pokhilko

Journal:

Year:

2008

Language:

english

File:

PDF, 384 KB

english, 2008

11

Computational modelling of chemotaxis in cooperative phenomena in bacterial populations

Vinayak Doraiswamy, Martin Buist, Andrew Goryachev

Journal:

BMC Systems Biology

Year:

2007

Language:

english

File:

PDF, 211 KB

english, 2007

12

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || || Front_matter

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

File:

PDF, 26 KB

2012

13

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Proteome-Wide Screens in Saccharomyces cerevisiae Using the Yeast GFP Collection

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 420 KB

english, 2012

14

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Unraveling the Complex Regulatory Relationships Between Metabolism and Signal Transduction in Cancer

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 161 KB

english, 2012

15

Singularity in Polarization: Rewiring Yeast Cells to Make Two Buds

Audrey S. Howell, Natasha S. Savage, Sam A. Johnson, Indrani Bose, Allison W. Wagner, Trevin R. Zyla, H. Frederik Nijhout, Michael C. Reed, Andrew B. Goryachev, Daniel J. Lew

Journal:

Year:

2009

Language:

english

File:

PDF, 1.49 MB

english, 2009

16

Self-signalling and self-fusion in filamentous fungi

Nick D Read, Alexander Lichius, Jun-ya Shoji, Andrew B Goryachev

Journal:

Current Opinion in Microbiology

Year:

2009

Language:

english

File:

PDF, 488 KB

english, 2009

17

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Receptor Dynamics in Signaling

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 257 KB

english, 2012

18

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Global Optimization in Systems Biology: Stochastic Methods and Their Applications

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 435 KB

english, 2012

19

The mechanistic basis of self-fusion between conidial anastomosis tubes during fungal colony initiation

Nick D. Read, Andrew B. Goryachev, Alexander Lichius

Journal:

Fungal Biology Reviews

Year:

2012

Language:

english

File:

PDF, 806 KB

english, 2012

20

Lateral Dynamics of Proteins with Polybasic Domain on Anionic Membranes: A Dynamic Monte-Carlo Study

Kiselev, Vladimir Yu., Marenduzzo, Davide, Goryachev, Andrew B.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 558 KB

english, 2011

21

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Theoretical Aspects of Cellular Decision-Making and Information-Processing

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 657 KB

english, 2012

22

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || A Modular Model of the Apoptosis Machinery

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 602 KB

english, 2012

23

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Early Patient Stratification and Predictive Biomarkers in Drug Discovery and Development

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 243 KB

english, 2012

24

Understanding Bacterial Cell−Cell Communication with Computational Modeling

Goryachev, Andrew B.

Journal:

Chemical Reviews

Year:

2011

Language:

english

File:

PDF, 430 KB

english, 2011

25

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || An Integrated Bayesian Framework for Identifying Phosphorylation Networks in Stimulated Cells

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 442 KB

english, 2012

26

Daughter Cell Identity Emerges from the Interplay of Cdc42, Septins, and Exocytosis

Okada, Satoshi, Leda, Marcin, Hanna, Julia, Savage, Natasha S., Bi, Erfei, Goryachev, Andrew B.

Journal:

Developmental Cell

Year:

2013

Language:

english

File:

PDF, 3.92 MB

english, 2013

27

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 ||

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

File:

PDF, 26 KB

2012

28

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Modular Analysis of Biological Networks

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 270 KB

english, 2012

29

Anillin Regulates Cell-Cell Junction Integrity by Organizing Junctional Accumulation of Rho-GTP and Actomyosin

Reyes, Ciara C., Jin, Meiyan, Breznau, Elaina B., Espino, Rhogelyn, Delgado-Gonzalo, Ricard, Goryachev, Andrew B., Miller, Ann L.

Journal:

Current Biology

Year:

2014

Language:

english

File:

PDF, 3.12 MB

english, 2014

30

Lateral dynamics of charged lipids and peripheral proteins in spatially heterogeneous membranes: Comparison of continuous and Monte Carlo approaches

Kiselev, Vladimir Yu., Leda, Marcin, Lobanov, Alexey I., Marenduzzo, Davide, Goryachev, Andrew B.

Journal:

The Journal of Chemical Physics

Year:

2011

Language:

english

File:

PDF, 775 KB

english, 2011

31

Cellular deformation and intracellular stress propagation during optical stretching

Teo, Soo-Kng, Goryachev, Andrew B., Parker, Kim H., Chiam, K.-H.

Journal:

Physical Review E

Year:

2010

Language:

english

File:

PDF, 396 KB

english, 2010

32

Unfolding of Microarray Data

Goryachev, Andrew B., Macgregor, Pascale F., Edwards, Aled M.

Journal:

Journal of Computational Biology

Year:

2001

Language:

english

File:

PDF, 329 KB

english, 2001

33

Improved Hepatocyte Excretory Function by Immediate Presentation of Polarity Cues

Ng, Susanne, Han, Rongbin, Chang, Shi, Ni, Jun, Hunziker, Walter, Goryachev, Andrew Boris, Ong, Sim Heng, Yu, Hanry

Journal:

Tissue Engineering

Year:

2006

Language:

english

File:

PDF, 975 KB

english, 2006

34

Highlight: The 5th International Workshop on Septin Biology

Mostowy, Serge, Bi, Erfei, Füchtbauer, Ernst-Martin, Goryachev, Andrew B., Montagna, Cristina, Nagata, Koh-ichi, Trimble, William S., Werner, Hauke B., Yao, Xuebiao, Zieger, Barbara, Spiliotis, Elias

Journal:

Biological Chemistry

Year:

2014

Language:

english

File:

PDF, 324 KB

english, 2014

35

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Multiscale Mechanistic Modeling in Pharmaceutical Research and Development

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 528 KB

english, 2012

36

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Identification of Sensitive Enzymes in the Photosynthetic Carbon Metabolism

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 503 KB

english, 2012

37

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || The Cell as a Thermostat: How Much does it Know?

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 141 KB

english, 2012

38

Transition to Quorum Sensing in an Agrobacterium Population: A Stochastic Model

Goryachev, Andrew B., Toh, Da-Jun, Wee, Keng Boon, Lee, Travis, Zhang, Hai-Bao, Zhang, Lian-Hui

Journal:

PLoS Computational Biology

Year:

2005

Language:

english

File:

PDF, 339 KB

english, 2005

39

[Advances in Experimental Medicine and Biology] Advances in Systems Biology Volume 736 || Stem Cell Differentiation as a Renewal-Reward Process: Predictions and Validation in the Colonic Crypt

Goryanin, Igor I., Goryachev, Andrew B.

Year:

2012

Language:

english

File:

PDF, 371 KB

english, 2012

40

Uncovering MicroRNA and Transcription Factor Mediated Regulatory Networks in Glioblastoma

Sun, Jingchun, Gong, Xue, Purow, Benjamin, Zhao, Zhongming, Goryachev, Andrew B.

Journal:

PLoS Computational Biology

Year:

2012

Language:

english

File:

PDF, 1.26 MB

english, 2012

41

From Pathways Databases to Network Models of Switching Behavior

Aguda, Baltazar D., Goryachev, Andrew B.

Journal:

PLoS Computational Biology

Year:

2007

Language:

english

File:

PDF, 335 KB

english, 2007

42

Computational Model Explains High Activity and Rapid Cycling of Rho GTPases within Protein Complexes

Goryachev, Andrew B., Pokhilko, Alexandra V.

Journal:

PLoS Computational Biology

Year:

2006

Language:

english

File:

PDF, 38 KB

english, 2006

43

Activator–inhibitor coupling between Rho signalling and actin assembly makes the cell cortex an excitable medium

Bement, William M., Leda, Marcin, Moe, Alison M., Kita, Angela M., Larson, Matthew E., Golding, Adriana E., Pfeuti, Courtney, Su, Kuan-Chung, Miller, Ann L., Goryachev, Andrew B., von Dassow, George

Journal:

Nature Cell Biology

Year:

2015

Language:

english

File:

PDF, 28.59 MB

english, 2015

44

Global Profiles of Gene Expression Induced by Adrenocorticotropin in Y1 Mouse Adrenal Cells

Schimmer, Bernard P., Cordova, Martha, Cheng, Henry, Tsao, Andrew, Goryachev, Andrew B., Schimmer, Aaron D., Morris, Quaid

Journal:

Year:

2006

Language:

english

File:

PDF, 182 KB

english, 2006

45

A common mechanism for protein cluster formation

Goryachev, Andrew B.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.22 MB

english, 2011

46

p190RhoGAP Is the Convergence Point of Adhesion Signals from α₅β₁ Integrin and Syndecan-4

Mark D. Bass, Mark R. Morgan, Kirsty A. Roach, Jeffrey Settleman, Andrew B. Goryachev and Martin J. Humphries

Journal:

The Journal of Cell Biology

Year:

2008

Language:

english

File:

PDF, 2.40 MB

english, 2008

47

Curvature-driven positioning of Turing patterns in phase-separating curved membranes

Vandin, Giulio, Marenduzzo, Davide, Goryachev, Andrew, Orlandini, Enzo

Journal:

Year:

2016

Language:

english

File:

PDF, 2.03 MB

english, 2016

48

How to make a static cytokinetic furrow out of traveling excitable waves

Goryachev, Andrew B., Leda, Marcin, Miller, Ann L., von Dassow, George, Bement, William M.

Journal:

Year:

2016

Language:

english

File:

PDF, 776 KB

english, 2016

49

Gradient Sensing: Engineering the Yeast Love Affair

Goryachev, Andrew B., Leda, Marcin

Journal:

Current Biology

Year:

2016

Language:

english

File:

PDF, 377 KB

english, 2016

50

Many roads to symmetry breaking: molecular mechanisms and theoretical models of yeast cell polarity

Goryachev, Andrew B., Leda, Marcin, Bement, William

Journal:

Molecular Biology of the Cell

Year:

2017

Language:

english

File:

PDF, 1.57 MB

english, 2017

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